ERP Systems Manager

Our Mission

We believe there is a smarter, more data-driven way to make decisions in healthcare and our cloud-native AI powered SOPHiA DDM Platform makes that vision a reality on a daily basis. You will have direct input to our mission to democratize data-driven medicine for the ultimate benefit of cancer and rare disease patients across the globe.

As a Financial Systems Manager, you will primarily act as the functional and operational owner of our ERP system (Microsoft Dynamics 365). This position will drive operational improvements and automation initiatives across Finance and Operations.

This role will be the key liaison between business teams and external consultants, ensuring our ERP ecosystem evolves to meet changing business needs, regulatory requirements, improved efficiency and industry best practices.

The ideal candidate is both strategic and hands‑on — a D365 super user who understands finance and supply chain processes, can manage priorities, and occasionally dive into integration or configuration work directly. This role requires a blend of business acumen, technical expertise, and leadership to maximize the value of our ERP investment.

• Serve as the primary functional owner of the ERP (Dynamics 365 Finance & Operations)
• Lead process improvement initiatives across Finance and Supply Chain
• Act as the main point of contact for ERP System Integrator, other consultants and manage the relationship effectively
• Prioritize and coordinate change requests, enhancements, and support tickets
• Own user management, licensing, and role-based access controls within the ERP
• Functional owner for SOX ITGCs related to the ERP responding to request from internal and external auditors, support Head of SOX in the implementation of segregation of duties (SoD) and internal control improvements
• Be the central contact for all ERP integration projects between financial and non-financial systems (CRM, AP tools, etc.)
• Perform or assist with technical integration and data mapping directly
• Collaborate closely with Finance, Supply Chain, and IT teams to ensure ERP alignment with business processes
• Lead acceptance testing, training, and documentation of new functionalities and additional financial systems

• Bachelor’s or Master’s degree in Finance, Information Systems, Business Administration, or related field
• Proven experience as an ERP functional owner, ERP manager, or super user (preferably Microsoft Dynamics 365 Finance & Operation)
• Strong understanding of finance and supply chain processes
• Experience managing external ERP consultants and prioritizing support or development requests
• Knowledge of user management, licensing, and role-based access controls
• Familiarity with segregation of duties (SoD) principles
• Experience with system integrations (APIs, data flows, connectors) — hands‑on skills a plus
• Excellent communication and coordination skills across business and technical teams
• Fluent in English (French is an asset)

• Sickness and Accident coverage through Helsana
• Meal Vouchers at 90
  
  CHF PM with our partner cafeteria
• A fun and engaging work environment, with Rest & Entertainment space, full stocked free coffee machine and free fruit/snacks
• Free parking in an easy to access location
• A strong social committee whose purpose is to make SOPHiA GENETICs both enjoyable as well as rewarding
• As our global HQ, you’ll have direct interaction and exposure to senior leadership and our executive team locally

• World's most innovative companies (Top 10)
• World's smartest companies (Top 50)
• 100 Best Places to Work in Boston
• Top 10 European Tech Startup
• Top 10 European biotechs startup to watch
• Top 25 East-Coast Biotech to watch

Like the strands of DNA itself, SOPHiA GENETICS and the team are deeply interconnected and reliant on each other to deliver. There are common threads across the team. Things that bind us together. Those things are Relentless Curious;
Resilient & Nimble and Fearlessly Adventurous

At SOPHiA GENETICS we established our 7 Virtues to clarify how our principles show up each day through action. We Decide;
We Do;
We Collaborate;
We Innovate;
We Empower;
We Adapt and We Learn. At the centre of our Virtues is our Mantra, We Care, which provides a constant reminder of the compassionate, benevolent, and hopeful nature of our mission and how it should be threaded through each of our Virtues and everything we do.

Jan 2026

Rolle, CH or Boston, MA

Permanent

Mid‑Senior level

Full‑time

Information Technology

Biotechnology