Research Programmer

The University of Southern California (USC), founded in 1880, is located in the heart of downtown Los Angeles and is the largest private employer in the City of Los Angeles. USC is consistently ranked among the nation's most prestigious universities, and the USC Leonard Davis School of Gerontology features one of the world's best degree and research programs in gerontology. The USC Davis School has an international reputation as a hub of aging research and, with additional strong programs throughout the university leads the way in defining and advancing the field of gerontology.

A 1-year Fixed Term Research Programmer I, Health Research position is available at the University of Southern California through the Bioinformatics Core in the Leonard Davis School of Gerontology.

The mission of the Gerontology Bioinformatics Core (GBC) is to facilitate the development of data analytic procedures to enable the translation of big data into research findings. The GBC supports researchers in their application of computational approaches to study biological processes in aging. In particular, we have a strong focus in using genomic data derived from diverse human cohorts to validate findings in model organisms to better understand the architecture of complex traits related to aging-related diseases and longevity.

For more information about the GBC ((Use the "Apply for this Job" box below).) or the Davis School of Gerontology (), click on the included links.

The GBC Research Programmer I will provide programming and analytical support for interdisciplinary projects that use large scale human datasets and genomics data, which includes genotype, whole genome sequencing, DNA methylation, and gene expression data. The key role of the individual in this position will be to calculate variables and run analytical pipelines that will be used to answer research questions that are instrumental for accelerating the pace of translational genomics relevant to human aging and for the development of therapeutic approaches for aging-related conditions.

The programmer will be an integral part of the research team and work closely with the core leaders to develop and implement coding approaches. Demonstrated knowledge of programming and/or scripting languages (i.e., R, python) is required for this position. The ideal candidate will be a person who has demonstrated skills in human genomics data analysis (e.g., GWAS, EWAS, TWAS, differential gene expression), using high performance computing clusters, managing large data files, documenting methods used for analytical procedures, applying statistical methods for working with repeated measures data, particularly from large-scale, population-based datasets.

High attention-to-detail, good organization and communication skills are essential. A requirement for this job is prior experience with genomic analyses in human cohorts.

The position provides opportunities to gain advanced skills; be involved in innovative projects that span biological, computational, and genomic sciences; participate in project development, and reporting on findings via grant applications and manuscripts. The individual will be involved in ongoing and developing research projects within the GBC and will be encouraged to further their own skills and training on efficient methods for examining genetic variation data, or understanding genetic architecture of aging-related diseases.

Opportunities are available to analyze large-scale genotyping and next-generation sequencing data in multiple population-based human cohorts.

The GBC fosters a work environment that is inclusive as well as diverse, where ideas and perspectives are valued. We are building a team where individuals can thrive, contribute to cutting-edge research related to health with aging, and collaboratively elevate translational science. We welcome applicants from all backgrounds and do not discriminate based on race, color, religion, sex, sexual orientation, gender identity or expression, national origin, age, disability, veteran status, marital status, or an individual's status in any group or class protected by applicable federal, state, or local law.

• Develop and document robust computational workflows, testing procedures, and production pipelines that support multi-omics analyses to support the Gerontology Bioinformatics Core.
• Develop datasets, create tables, perform analyses, and otherwise…