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Principal Scientist I​/II, Medicinal Chemistry ; San Diego

Job in New York, New York County, New York, 10261, USA
Listing for: Schrodinger, Inc.
Full Time position
Listed on 2026-10-29
Job specializations:
  • Research/Development
    Drug Discovery, Medicinal Chemist, Research Scientist
Salary/Wage Range or Industry Benchmark: 150000 - 200000 USD Yearly USD 150000.00 200000.00 YEAR
Job Description & How to Apply Below
Principal Scientist I / II, Medicinal Chemistry

We’re looking to hire a Principal Scientist in Medicinal Chemistry to join us in our mission to discover and develop drugs that improve human health through the use of breakthrough computational methods.

Our drug discovery and early clinical development team includes a cross-functional group of scientists and drug developers with experience working on all common target classes and therapeutic areas. We’re supported by more than 100 software developers and engineers, as well as a large-scale computational infrastructure to apply our proprietary physics-based drug design and optimization platform. Several programs we have worked on have achieved development candidates, including progression to clinical development and FDA approval.

View our entire pipeline of wholly-owned programs and collaborations here .

The specific job title will be determined based on the candidate's experience and qualifications.

Who will love this job:
  • A passionate scientist with a robust background in structure-based drug design
  • A team player skilled at working in a dynamic, multidisciplinary environment
  • An excellent communicator and presenter
  • A dedicated collaborator who enjoys working with geographically distributed teams
What you’ll do:
  • Contribute to Schrödinger's drug discovery programs as a medicinal chemist
  • Support and execute medicinal chemistry strategies to deliver high quality clinical candidates
  • Manage chemistry CROs to ensure efficient program execution
  • Collaborate with computational chemists and modelers on the application of Schrödinger's computational platform for rapid advancement of drug discovery programs
What you should have:
  • PhD in synthetic organic or medicinal chemistry
  • At least four years of drug discovery experience in a pharmaceutical and/or biotech setting
  • Proficiency in Structure-Based Drug Design (SBDD)
  • Extensive experience in working with external chemistry teams at CROs
  • Contemporary knowledge of key Medicinal Chemistry concepts and good understanding of biology, pharmacology, drug metabolism and pharmacokinetics
  • Experience working in geographically distributed teams
  • Any of the following would be a plus:
  • Experience in leading drug discovery projects (as medicinal chemistry lead or project lead)
  • Experience with therapeutic modalities beyond small molecules in particular with peptides and bRo5 chemical space

Schrödinger understands it's people that make a company great. Because of this, we're prepared to offer a competitive salary, equity-based compensation, and a wide range of benefits that include healthcare (with dental and vision), a 401k, pre-tax commuter benefits, a flexible work schedule, and a parental leave program. We have catered meals in the office, a company culture that is relaxed but engaged, and over a month of paid vacation time.

Our Administrative and Human Resources departments also plan a myriad of fun company-wide events. New York is home to our largest office, but we have teams all over the world. Schrödinger is honored to have been included in Crain's New York Best Places to Work, Built In's NYC Best Place to Work, and Newsweek's list of America's 100 Most Loved Workplaces.

Estimated base salary range: $150,000 - $200,000. Actual compensation package is dependent on a number of factors, including, for example, experience, education, degrees held, market data, and business needs. If you have any questions regarding the compensation for this role, do not hesitate to reach out to a member of our Strategic Growth team.

As an equal opportunity employer, Schrödinger hires outstanding individuals into every position in the company. People who work with us have a high degree of engagement, a commitment to working effectively in teams, and a…

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