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Senior ML Researcher — Structural Biology & Drug Discovery

Remote / Online - Candidates ideally in
Philadelphia, Philadelphia County, Pennsylvania, 19113, USA
Listing for: Accendum
Full Time, Remote/Work from Home position Listed on 2026-11-14
Job specializations:
Salary/Wage Range or Industry Benchmark: 130000 - 180000 USD Yearly USD 130000.00 180000.00 YEAR

Job Description & How to Apply Below

Role overview

A senior research position leading structure-based work at the intersection of generative chemistry, structural biology, and physical simulation. The researcher owns the path from a chosen target protein to a small set of credible therapeutic candidates end-to-end, partnering closely with engineering. The role combines rigorous experimental design with a strong delivery bias: research that produces code other senior scientists can defend.

Responsibilities
  • Lead protein-structure modelling, ligand-protein interaction prediction, and binding-affinity studies for selected targets.
  • Design, run, and ship virtual screening campaigns over large compound libraries with principled ranking and triage.
  • Pair structural machine learning with physical simulation, including molecular dynamics and free-energy methods, when it improves outcomes.
  • Convert research prototypes into pipelines that engineering can operate, with reviewer-friendly code.
  • Communicate findings clearly to mixed technical and scientific audiences and engage with external collaborators.
  • Mentor junior researchers and lift the experimental bar of the team.
Requirements
  • PhD in computational chemistry, biophysics, structural bioinformatics, computer science, or an adjacent machine learning field.
  • Demonstrated work in modern structural or biomolecular ML, such as geometric deep learning, equivariant networks, protein-structure models, or generative chemistry.
  • Strong Python and PyTorch (or JAX), with fluency in libraries like RDKit, OpenMM or GROMACS, Bio Python, and ESM- or Alpha Fold-class models.
  • A track record of published work, preprints, or shipped scientific software.
  • Mature software-engineering habits: version control, code review, testing, and reproducibility.
  • Excellent written and spoken communication in English.
Benefits and work setup
  • Compute and tooling appropriate to the problem at hand.
  • Conference, publication, and collaboration support.
  • Flexible remote work across European and Americas time zones.

Position Requirements

10+ Years work experience
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