Bioinformatics Analyst​/Engineer

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Parsons is seeking Bioinformatics Analysts/Engineers to support infectious-disease genomics, biosurveillance, automated pipeline development, and fieldable bioinformatics at NMRC BDRD. These positions will combine genomic-data analysis with software-development and analytical-support responsibilities.

Selected candidates will analyze data from a variety of sequencing technologies and sample types, improve automated workflows, support partner laboratories, and help deliver timely analytical results for biodefense and force health protection.

• Process and analyze NGS data from bacterial, viral, bacteriophage, clinical, environmental, wastewater, vector, and animal samples.
• Develop, test, maintain, and document bioinformatics pipelines.
• Perform sequence-quality control, genome assembly, annotation, and taxonomic analysis.
• Conduct phylogenetic, molecular epidemiological, and comparative-genomics analyses.
• Support pathogen discovery and detection of known and novel organisms.
• Benchmark analytical workflows and document performance results.
• Develop or improve scripts, software tools, databases, and fieldable analytical methods.
• Prepare scientific data and metadata for secure delivery or approved database submission.
• Support AI/ML analyses and model testing when assigned.
• Troubleshoot data, pipeline, and software issues.
• Develop technical documentation, user guides, and training materials.
• Support field demonstrations, partner training, and scheduled reach-back assistance.
• Collaborate with laboratory scientists, software engineers, and CONUS or OCONUS partners.

• Master’s degree in bioinformatics, computational biology, computer science combined with biology or bioinformatics experience, or a closely related field.
• At least five years of hands‑on bioinformatics experience.
• Demonstrable applied experience in computer science, genomics, bioinformatics, and computational biology.
• Programming skills using languages and statistical tools such as Java, Perl, Python, and R.
• Familiarity with relevant NGS platforms, including Illumina, Pac Bio, and ONT technologies.
• Familiarity with microarray and/or single-cell sequencing technologies.
• Strong written and verbal communication, independent thinking, and problem‑solving skills.
• Ability to perform under deadlines and in potentially austere environments.
• Ability to provide occasional after‑hours support based on assigned mission requirements.
• Availability for national and international travel of up to two to four weeks.
• U.S. citizenship due to federal contract requirements.
• Eligibility to obtain and maintain a Secret security clearance and required Government access.

• Experience with pathogen genomics, metagenomics, biosurveillance, or emerging infectious diseases.
• Experience with reproducible workflows, containers, version control, cloud, or high‑performance computing.
• Experience with genome assembly, annotation, phylogenetics, or molecular epidemiology.
• Experience with wastewater or environmental surveillance.
• Experience with fieldable or disconnected bioinformatics systems.
• Experience supporting DoD or international partner laboratories.
• Experience creating technical documentation or delivering training.
• An active Secret security clearance.

These positions are expected…