Senior Causal Inference & Mathematical Modeling Scientist; Hybrid Systems | Bayesian Causality
Listed on 2026-02-16
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IT/Tech
Data Scientist, AI Engineer, Machine Learning/ ML Engineer
Ayass Bioscience is building a next-generation hybrid causal inference platform (BiRAGAS) that integrates established biological knowledge with data-driven discovery to produce interpretable, regulatory-defensible causal models.
We are seeking a senior scientist with deep expertise in mathematical modeling, causal inference, and Bayesian methods to design and implement the mathematical foundations of our hybrid architecture. This role complements our existing machine learning and bioinformatics team by owning the formal equations, priors, and inference machinery that translate biology into rigorous causal models.
This is not a standard ML role. It is a foundational modeling role at the core of the platform.
Core Responsibilities- Translate biological knowledge graphs (pathways, directional mechanisms, interventions) into formal mathematical representations
- Define and implement Bayesian priors over causal graph structures (e.g., ( P(G) ∝ exp(∑ θij) ))
- Formalize constraints, forbidden edges, soft priors, and fixed anchors within causal discovery algorithms
- Ensure mathematical consistency across graph structure learning, parameter estimation, and uncertainty quantification
- Design and adapt constrained causal discovery algorithms (PC, GES, score-based, hybrid methods)
- Incorporate biological directionality, pathway topology, genetic anchors (eQTL/pQTL), and intervention data as first-class constraints
- Address known causal challenges:
- Finite sample limitations
- High-dimensional gene expression spaces
- Develop and fit Structural Equation Models (SEMs) on biologically constrained graphs
- Estimate context-specific causal effect sizes with confidence intervals
- Support heterogeneous effects, moderators, and disease- or tissue-specific contexts
- Define the mathematical framework for integrating statistical evidence, priors, genetic evidence, and mechanistic plausibility
- Contribute to a composite causal confidence score that moves beyond p-values toward actionable inference
- Design principled approaches to resolve conflicts between data-driven signals and database knowledge
- Work closely with:
- ML engineers (who implement scalable systems)
- Bioinformaticians (who prepare and interpret omics data)
- Domain scientists (who curate biological knowledge)
- Act as the mathematical authority bridging biology and machine learning
Mathematical & Statistical Background
Causal Inference & Modeling
Computational Skills
- Experience implementing mathematical models that scale to high-dimensional data
- Ability to work with ML teams without being a “black-box ML” practitioner
Strongly Preferred (but Not Required)
- Experience in systems biology, genomics, transcriptomics, or proteomics
- Familiarity with biological pathway databases (KEGG, Reactome, SIGNOR, etc.)
- Prior work on regulatory-facing, interpretable models in life sciences
- Experience translating theory into production-grade inference pipelines
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