Senior Manager, Pre-Clinical Program and Alliance Management

Senior Manager, Pre-Clinical Program and Alliance Management

Lexington, MA

Kiniksa Pharmaceuticals is a commercial‑stage biopharmaceutical company developing and commercializing novel therapies for diseases with unmet need, with a focus on cardiovascular indications. With deep expertise in immunology and inflammation, Kiniksa is advancing a growing portfolio of approved and investigational medicines, anchored by its lead product, ARCALYST®, the first and only FDA‑approved therapy for recurrent pericarditis. Grounded in rigorous science and bold innovation, the company fosters a highly collaborative, patient‑first culture led by accomplished life sciences leaders.

At Kiniksa, talented individuals are trusted and empowered to make a real impact—shaping the future of medicine while improving the lives of patients who need it most.

Kiniksa is seeking a highly organized and execution‑oriented Sr. Manager, Pre‑Clinical Program and Alliance Management to drive the operational planning, integration, and delivery of pre‑clinical programs from candidate nomination through successful IND filing and acceptance. The role reports to Group Vice President, Chief Business Officer.

This individual will serve as the central operational hub for one or more pre‑clinical assets, coordinating cross‑functional activities across research, CMC, nonclinical safety/toxicology, translational, regulatory, and program leadership, while also managing day‑to‑day interactions with external partners, CROs, and collaborators. The Sr. Manager will be accountable for building and maintaining integrated program plans, anticipating critical path risks, and ensuring alignment of internal stakeholders and external alliance partners against shared IND‑enabling milestones.

This role is based in our Lexington, MA office and requires employees to be onsite five days per week.

• Build and drive integrated cross‑functional program plans, timelines, and budgets from candidate selection through IND filing and acceptance, with clear critical path, dependencies, and decision points across CMC, nonclinical safety/toxicology, translational, and regulatory work streams.
• Partner with program leadership to define goals, governance cadence, and decision frameworks; run core team and governance meetings and ensure timely follow‑through on actions.
• Maintain line of sight to FDA IND data package requirements; track module completion and ensure cross‑functional alignment on content, quality, and timing.
• Partner with Regulatory Affairs and functional leads to execute IND‑enabling activities (GLP toxicology, safety pharmacology, CMC, analytical methods, translational readiness) and to prepare for and follow up from FDA interactions (e.g., pre‑IND, Type B/C meetings).
• Proactively identify and mitigate program risks; communicate status, milestones, and resource needs to senior leadership through concise, executive‑ready updates.
• Drive operational excellence and continuous improvement, including evaluation and adoption of emerging AI and digital tools to enhance program execution.
• Serve as the day‑to‑day operational point of contact for external partners (collaborators, licensors, academic groups, CROs), ensuring clear communication and timely issue resolution.
• Manage governance structures under collaboration, license, and services agreements (e.g., JSCs, working groups) and ensure adherence to contractual obligations and deliverables.
• Partner with Business Development, Legal, and Finance to track milestones, deliverables, and payments, and to support amendments, SOWs, and tech transfer plans.

• Entrepreneurial mindset with a bias for action and ownership
• Thrives under pressure, consistently delivering against aggressive timelines
• Expert in balancing risk and acceleration to optimize program outcomes
• Drives pre‑clinical programs forward to the clinic with speed and precision

• Bachelor's degree in relevant scientific discipline (e.g., Biology, Biochemistry, Pharmacology, Chemistry); advanced degree (M.S., Ph.D., Pharm.D.) a plus.
• 8+ years of biotech or pharmaceutical experience,…