Biomedical Systems Engineer; Part-time

Overview

Currently I have an opening for a Biomedical Knowledge Systems Engineer, Remote (Part-time hours). Details for the position are as follows:

• We are seeking an exceptionally specialized Biomedical Knowledge Systems Engineer to oversee the ongoing maintenance, modernization, and enhancement of a suite of legacy and contemporary applications that power our scientific knowledge discovery platform.
• Legacy System Ownership:
  Independently manage, maintain, and evolve our custom semantic scientific search platform, performing high-level refactoring, troubleshooting, and architectural upgrades as necessary.
• Administrative Stewardship:
  Provide comprehensive administrative, operational, and development support for legacy biomedical informatics systems, including the Gene-Disease Association Knowledgebase and FDA Label Search, requiring extensive familiarity with their unique data models and workflows.
• Expert Data Migration:
  Architect and execute complex data migrations, including document and vector database transformations from Mark Logic to Mongo
  
  DB, while ensuring absolute preservation of biomedical metadata fidelity and auditability in compliance with regulatory standards.
• GenAI-Driven Knowledge Discovery:
  Design, build, and optimize scalable GenAI-based applications (leveraging frameworks such as Vue.js) to expand automated scientific knowledge extraction, semantic enrichment, and cross-source information synthesis.
• Regulatory Analytics:
  Provide analytical and technical leadership on automated conversion of clinical trial results into regulatory-compliant FDA submission templates, integrating data from multiple sources.
• Continuous Architecture Evolution:
  Lead ongoing modernization strategies by advising on best-practices for system interoperability, performance tuning, and secure deployment in hybrid cloud environments.

• Bachelor’s degree in Computer Science, Bioinformatics, or a related discipline, with a minimum of 3 years’ dedicated experience in software development and highly specialized biomedical system administration.
• Hands-on experience with both Mark Logic and Mongo
  
  DB document databases
• Demonstrated proficiency in advanced AWS services (Secrets Manager, Elastic Beanstalk, EC2)
• Expertise with NLM biomedical data infrastructures (including Pub Med, PMC, and Gene Expression Omnibus)
• Experience with NLP, GenAI, LLM agentic frameworks applied to real-world biomedical use-cases
• Highly proficient in full-stack engineering, with significant track record in modern frontend frameworks (including Vue.js or equivalent), backend API design, and cloud-based microservices architecture tailored to scientific workflows.

• 12-month contract with potential for extension
• Part-time hours (working 20 hours per week), fully remote
• Pay: $79.58 hourly (W2)