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Mass Spectrometry Scientist LCMSMS HRMS GCMS

Job in Olympia, Thurston County, Washington, 98502, USA
Listing for: Vanguard Laboratory
Full Time position
Listed on 2026-09-22
Job specializations:
  • Research/Development
    Research Scientist
Salary/Wage Range or Industry Benchmark: 64000 - 88000 USD Yearly USD 64000.00 88000.00 YEAR
Job Description & How to Apply Below

Work setting: On-site laboratory position

Who We Are

Pay: $64,000–$88,000 per year

Job type: Full-time

Location: Olympia, Washington

Work setting: On-site laboratory position

Who We Are

Vanguard Laboratory is a small, family-owned analytical chemistry and microbiology laboratory in Olympia, Washington. We test food and beverage products, pharmaceuticals, supplements, peptides, SARMs/SERMs, nootropics, agricultural products, drinking water, and environmental samples.

We operate under an ISO/IEC 17025 quality-management system and maintain accreditations through A2LA and Washington State agencies. We are expanding our mass spectrometry, pharmaceutical, peptide, supplement, and small-molecule testing capabilities.

Position Overview

We are seeking a well-rounded Mass Spectrometry Scientist with strong hands-on experience in instrument operation, method development, troubleshooting, data interpretation, and technical documentation.

Experience analyzing peptides, pharmaceuticals, dietary supplements, or related small molecules is strongly preferred
.

This is not a narrowly defined production-testing position. The successful candidate will work with LC-MS/MS, Orbitrap HRMS, GC-MS, HPLC, and UHPLC. Responsibilities include developing and validating methods, performing routine testing, investigating unexpected results, reviewing data, maintaining instruments, and training other analysts.

Our instrumentation includes a SCIEX 4500 QTRAP LC-MS/MS, Thermo Scientific Orbitrap Exploris 120, GC-MS systems, and HPLC/UHPLC systems with UV/DAD and other detectors. Experience with comparable platforms is welcome.

What You Will DoMass Spectrometry and Chromatography
  • Operate, maintain, and troubleshoot LC-MS/MS, HRMS, GC-MS, HPLC, and UHPLC systems.
  • Develop targeted LC-MS/MS methods using MRM and other appropriate acquisition modes.
  • Perform HRMS analysis for accurate-mass confirmation, isotope-pattern evaluation, charge-state analysis, spectral deconvolution, and impurity characterization.
  • Perform qualitative and quantitative GC-MS analysis where appropriate.
  • Optimize sample preparation, extraction, cleanup, columns, mobile phases, gradients, source conditions, collision energies, acquisition parameters, and processing settings.
  • Establish efficient, high-throughput workflows without compromising traceability, system suitability, or data quality.
  • Perform routine analyses when needed to support client turnaround times.
Peptide, Pharmaceutical and Supplement Testing
  • Analyze synthetic peptides, pharmaceutical ingredients, finished products, dietary supplements, research compounds, and related materials.
  • Confirm identity using reference standards, retention time, accurate mass, isotope pattern, and MS/MS fragmentation.
  • Evaluate peptide charge states, adducts, fragments, degradation products, and sequence-related impurities.
  • Investigate oxidation, deamidation, truncations, deletion sequences, hydrolysis products, synthesis byproducts, and other modifications.
  • Develop quantitative methods for active ingredients, impurities, adulterants, degradation products, and contaminants.
  • Address matrix effects, ion suppression or enhancement, extraction recovery, analyte adsorption, solubility, carryover, and stability.
  • Support screening and confirmation methods for supplement actives, undeclared adulterants, SARMs/SERMs, nootropics, and other small molecules.
  • Provide defensible interpretations without overstating what the data demonstrate.
Method Development and Validation
  • Develop, optimize, verify, validate, and implement analytical methods.
  • Review scientific literature, compendial procedures, regulatory references, and manufacturer information.
  • Design validation studies addressing specificity, selectivity, linearity, range, accuracy, recovery, precision, LOD/LOQ, carryover, matrix effects, dilution integrity, stability, robustness, and measurement uncertainty where applicable.
  • Document development trials, including unsuccessful approaches and troubleshooting decisions.
  • Prepare validation protocols and reports, SOPs, worksheets, instrument procedures, review checklists, and training records.
  • Transition validated methods into routine use and train analysts before independent testing.
Data Review, Troubleshooting and Quality
  • Review chromatograms, mass spectra, calibration models, system-suitability results, controls, blanks, calculations, technical data packages, and Certificates of Analysis.
  • Evaluate integration, retention time, ion ratios, mass accuracy, isotope fit, spectral quality,…
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