Bioinformatics Staff Scientist at NSF-NCEMS

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** APPLICATION INSTRUCTIONS:*** ## CURRENT PENN STATE EMPLOYEE (faculty, staff, technical service, or student), please to complete the. Please do not apply here, apply internally through Workday.* ## If you are NOT a current employee or student, please click “Apply” and complete .###
** Approval of remote and hybrid work is not guaranteed regardless of work location. For additional information on remote work at Penn State, see .
** This position is funded for 3 year(s); continuation past 3 year(s) will be based on university need, performance, and/or availability of funding.###   
** POSITION SPECIFICS
** The  and the  at Penn State seeks an outstanding scientist to fill a
** Bioinformatics Staff Scientist (Research Data Scientist - Intermediate Professional)
** position dedicated to advancing the collaborative research of the Center’s .NCEMS is an interdisciplinary research Center positioned at the interface of data science with molecular and cellular biology. The Center provides leadership in the integration of diverse, publicly available datasets, enabling cross-disciplinary teams of scientists to synthesize knowledge and pursue fundamental questions at the forefront of the life sciences.
** About the Position:
** Bioinformatics Staff Scientists play a supporting role in enabling the research efforts of multidisciplinary scientific teams supported by NCEMS, typically contributing to 2-3 projects simultaneously.
** Work Arrangement:
** This position has the potential to be a hybrid of remote and on-site work, with a minimum requirement of 3 days per week on-site at the Penn State University Park campus. This position does not permit fully remote work.
** Responsibilities:
*** Collaborate with NCEMS Working Groups to design and implement computational methods for integrating, analyzing, and visualizing complex molecular and cellular biology data
* Lead data wrangling, harmonization, standardization, and quality control of existing biological datasets, with emphasis on next-generation sequencing data.
* Develop and apply end-to-end data processing workflows from raw data across modern experimental modalities (including, for example, RNA-seq, scRNA-seq, ChIP-seq, DNA-seq, ATAC-seq, and Hi-C).
* Advise on the selection, development, and application of bioinformatics tools and pipelines (e.g., alignment, expression analysis, variant calling) using open and reproducible science best practices.
* Support the publication of intermediate data products, code, and documentation.
* Stay up-to-date with the latest advancements in bioinformatics, computational biology, and available biological datasets.
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* Education and Experience:

*** M.S. or PhD in Computational Biology, Bioinformatics, Computer Science, Statistics, Data Science, or a related field is preferred.
* Strong proficiency in Python and/or R for data analysis, scripting, and statistical modeling.
* Demonstrated experience processing raw next-generation sequencing data and developing end-to-end, reproducible analysis workflows.
* Experience working with complex molecular and cellular datasets, such as genomic, transcriptomic, epigenomic, proteomic, metabolomic/lipidomic, and single-cell or multi-omics data.
* Solid understanding of genetic principles, molecular biology techniques, and genomic databases.
* Experience developing new bioinformatics tools as dictated by research needs.
* Publications in peer-reviewed journals demonstrating contributions to the field.
* Experience supporting/contributing to multi-PI projects.

Candidates must also demonstrate a commitment to ethical conduct and research integrity, strong work ethic, strong interpersonal and written communication skills, and the ability to work well in a team environment.
** Application materials:
** Required documents include the following:
* A current Curriculum Vitae (CV) or Resume
* A cover letter detailing the candidate’s interest in the role
** Benefits:
** Penn State provides a competitive benefits package for full-time employees designed to support both personal and professional well-being. For more detailed information, please visit our
** MINIMUM EDUCATION, WORK EXPERIENCE & REQUIRED CERTIFICATIONS
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