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Associate Director of Program Management

Job in Redwood City, San Mateo County, California, 94061, USA
Listing for: Codexis, Inc.
Full Time position
Listed on 2025-12-30
Job specializations:
  • Science
    Research Scientist
Salary/Wage Range or Industry Benchmark: 170000 - 200000 USD Yearly USD 170000.00 200000.00 YEAR
Job Description & How to Apply Below

Associate Director of Program Management

Department: 35 - Corporate Development

Employment Type: Full Time

Location: Redwood City, CA

Compensation: $170,000 - $200,000 / year

Description

Codexis, a biotechnology company based in Redwood City, CA, is looking to hire an Associate Director of Program Management .

Codexis is a leading enzyme engineering company leveraging its proprietary Code Evolver technology platform to discover, develop and enhance novel, high-performance enzymes and other classes of proteins. Codexis enzymes solve for real-world challenges associated with small molecule pharmaceuticals manufacturing and nucleic acid synthesis. The Company is currently developing its proprietary ECO Synthesis platform to enable the scaled manufacture of RNAi therapeutics through an enzymatic route.

Codexis enzymes can drive improvements, such as higher yields, reduced energy usage and waste generation, improve efficiency in manufacturing and greater sensitivity in genomic and diagnostic applications.

To meet the goals we’ve set for ourselves, we look for individuals who are driven, eager to grow and ready to embrace meaningful challenges. We empower employees to be authentic, ambitious, agile and have the courage to take action where they can make a positive impact.

Come join us on this journey to transform the enzyme engineering landscape for the betterment of human health.

About the Opportunity:

Associate Director of Program Management within our RNA Manufacturing team is responsible for partnering with all areas of the business to help advance customer assets into and through the clinic using ECO Synthesis technology.

In this role you will be responsible for overseeing both Codexis internal R&D Programs and customer programs centered on RNA manufacturing. Working directly with ECO Synthesis Innovation colleagues to develop the enzymatic platform and implement its use in customer programs. The Associate Director of Program Management will support customer programs for siRNA manufacturing via the ECO Innovation lab through GMP manufacturing in support pre-clinical and clinical studies for our customers.

The Associate Director of Program Management is responsible for understanding all aspects and interdependencies of the internal R&D and customer programs and is accountable for managing timelines and key deliverables by working with subject matter experts and departmental representatives to coordinate operational activities. The Associate Director of Program Management will lead the process to ensure all client goals and stage gates are met, identifying and elevating risks and opportunities to achieve success.

If any of the below describes you, we would love to meet you!

  • Highly goal- and result oriented
  • Strong interpersonal skills
  • Strong, effective communication (verbal and written)
  • Highly organized
  • Attention to detail
In this role you will be responsible for:
  • Engage with Business Development (BD) and customers during opportunity qualification and development of proposals and business cases, including cost/margin analysis.
  • Lead multiple complex projects for both internal R&D and customer programs, working closely with commercial, technical, and quality/regulatory counterparts:
    • Act as the key liaison between internal Codexis teams within research, development, and operations.
    • Drive the definition, stakeholder alignment, and documentation of deliverables for development and commercialization projects.
    • Develop budgets, schedules, project plans, and resource requirements, identifying critical path, milestones, and interdependencies.
    • Ensure that projects are executed on time and within budget, and/or that exceptions are appropriately escalated and managed.
    • Lead teams in risk identification and assessment processes to effectively balance risk and reward, and identify and escalate when mitigation actions are needed.
    • Support prioritization across programs based on resource needs (FTE and budget), timelines, and complexity.
  • Lead customer projects from concept to completion, partnering with both internal and external cross-functional teams and stakeholders:
    • Manage client programs to manufacture siRNA drug substances and oversee projects through scale-up at CDMO and future clinical trials.
    • Collaborate with Business Development to review new proposals and address scope changes.
    • Submit milestone invoices to Finance and provide revenue updates.
    • Promptly share project documentation (e.g., minutes, emails, data) capturing critical information for relevant stakeholders.
    • Ensure communication is clear, timely, and sensitive, especially in the case of deviations.
    • Develop team members to continuously improve performance to meet business needs.
  • Lead efforts to identify and evaluate areas for improvement in project processes:
    • Collaborate with other departments to improve support for changing business needs.
    • Contribute recommendations for process and administrative improvements to address inefficiencies.
The essential requirements of the job include:
  • Bachelor's…
Position Requirements
10+ Years work experience
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