Bioinformaticist - Neurology

Location: St. Louis

Location SAINT LOUIS, MO 63110

Scheduled Hours
40

Position Summary The Orr Lab is seeking support for computational and quantitative research focused on aging, neurodegeneration, and human disease. The successful candidate will work closely with bioinformatics scientists, experimental researchers, and collaborators to analyze, integrate, and interpret complex high-dimensional molecular datasets.

This position will support projects spanning multiple omics technologies, including spatial proteomics and transcriptomics, bulk transcriptomics, single-cell and single-nucleus RNA sequencing, proteomics, epigenomics, and whole-exome/genomic sequencing. The candidate will contribute to the full analytical workflow, including data quality assessment, preprocessing and normalization, statistical modeling, dimensionality reduction, network analysis, multi-omic integration, visualization, and biological interpretation.

A major focus of the position will be the development and application of statistically rigorous, reproducible, and scalable computational workflows. The ideal candidate will understand not only how to use established bioinformatics tools, but also how to select appropriate analytical approaches based on the experimental design, structure of the data, and biological question.

The individual will work in a highly collaborative research environment and will contribute analytical results to manuscripts, abstracts, presentations, grant applications, and ongoing research discussions.

Job Description Primary

Duties & Responsibilities:

Designs, develops, and implements:

Algorithms and computer software for omics-based data sets [high-throughput, massively parallel genomic/proteomic/clinical.]Data management and analysis solutions that aid in the storage, investigation, and dissemination of large data sets.

Independent research projects, including design of research protocols and development of procedures for the collection, verification, and management of data.

Develop clear, informative, and publication-quality data visualizations, including heatmaps, dimensionality-reduction plots, statistical summaries, pathway/network visualizations, and other figures appropriate for scientific communication.

Perform data quality control, preprocessing, normalization, filtering, identifying technical artifacts, outliers, batch effects, and other sources of unwanted variation.

Perform comprehensive analysis of high-dimensional omics datasets, including:

Spatial transcriptomic and spatial proteomic datasets

Bulk RNA sequencing

Single-cell and single-nucleus RNA sequencing

Proteomic datasets

Epigenomic datasets

Whole-exome and genomic sequencing data Analyze single-cell and single-nucleus sequencing datasets, including:

Cell- and sample-level quality control

Normalization and feature selection

Dimensionality reduction

Clustering

Cell-type annotation

Differential expression

Pseudo bulk analysis

Cell-composition and differential-abundance analysis

Pathway, gene set enrichment, and functional/network analysis

Integration across samples, batches, conditions, or datasets

Evaluates commercial and academic bioinformatics software.

Work closely with wet-lab scientists, neuropathologists, statisticians, computational researchers, and external collaborators to translate biological questions into appropriate computational analyses.

Trains other researchers on the everyday use of analysis software and research databases.

Assists with grant preparation and reporting of methods, data, and results.

Solves practical problems relating to difficulties with equipment or test subjects; suggests technical or procedural improvements in testing methods.

Working Conditions:

Job Location /Working Conditions Normal Office Environment Physical Effort Typically Sitting at a desk or table

Equipment

Office Equipment The above statements are intended to describe the general nature and level of work performed by people assigned to this classification. They are not intended to be construed as an exhaustive list of all job duties performed by the personnel so classified. Management reserves the right to revise or amend duties at any time.

Required Qualifications

Education:

Bachelor's…