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Software Engineer - Backend & Systems Integration

Job in San Carlos, San Mateo County, California, 94071, USA
Listing for: Clear Labs
Full Time position
Listed on 2026-05-11
Job specializations:
  • Software Development
    Backend Developer, Cloud Engineer - Software, DevOps, Software Engineer
Salary/Wage Range or Industry Benchmark: 121500 - 150000 USD Yearly USD 121500.00 150000.00 YEAR
Job Description & How to Apply Below

About Clear Labs

Clear Labs harnesses the power of next-generation sequencing (NGS) to simplify complex diagnostics for clinical and applied markets. By creating a fully automated platform that brings together DNA sequencing, robotics, and cloud-based analytics, Clear Labs democratizes genomics applications to deliver better clarity. Clear Labs’ turnkey platform accelerates outcomes and improves accuracy from food-borne pathogens to infectious diseases.

The Opportunity

We are looking for a Mid-Senior Backend Software Engineer to join our lean, high-impact engineering team. This role is a critical replacement for a key team member and focuses on the "connective tissue" of our platform—building robust backend services and complex integrations between our physical lab hardware and cloud-based ecosystem.

You will be responsible for translating complex business requirements into clean, tested code that runs across our GCP stack and on-prem services. This isn't just about writing APIs; it’s about architecting resilient systems that integrate with major bioinformatics platforms, specialized software, and clinical middleware (LIMS/EHR).

Primary Responsibilities
  • Backend & On-site Instrument Service Development:
    Develop and maintain 30+ microservices and databases. You will own the full lifecycle of backend features, from Domain‑Driven Design (DDD) to implementation and testing.
  • Systems Integration:
    Analyze and build seamless bridges between Clear Labs and external partners (e.g., external analysis pipelines and LIMS/EHR middleware).
  • Architecture & Design:
    Drive the technical design of scalable, resilient, distributed systems using Kubernetes (GKE), Pub/Sub, and MySQL.
  • On‑Market Support:
    Act as a high‑level tier for production escalations, providing triaging and troubleshooting for issues within the backend and grid service layers.
  • Performance & Resilience:
    Optimize existing services for scalability as our customer base and data volume grow.
  • Security & Compliance:
    Contribute to the hardening of our systems as we move toward SOC2 and ISO 27001 compliance.

Applicants must be currently authorized to work in the United States on a full‑time basis; no visa sponsorship is available for this position.

Position Requirements
  • Experience
    : 4+ years of professional software development experience, with a heavy focus on backend systems.
  • Language Proficiency
    :
    Deep understanding of Java, Java script/Typescript, or Python.
  • Testing
    :
    Has a strong affinity for writing unit and integration tests
  • Cloud & Infrastructure
    :
    Hands‑on experience with a Cloud Computing Service (e.g. AWS, Azure, or Google Cloud Platform (GCP)) and Kubernetes (K8s). Understanding of VM‑based vs. containerized deployments is essential.
  • Database & Messaging
    :
    Proficiency with MySQL, Redis, and message brokers (e.g. GCP Cloud Pub/Sub and Rabbit

    MQ).
  • Architectural Mindset
    :
    Deep understanding of software design patterns, specifically Domain‑Driven Design, to ensure code is clean, maintainable, and testable.
  • Problem Solving
    : A proven track record of triaging complex production issues in a distributed system environment.
Nice to Have
  • Experience with LIMS or EHR integrations (HL7, FHIR, etc.).
  • Prior experience in Cybersecurity, specifically implementing controls for SOC2 or ISO 27001.
  • Familiarity with bioinformatics tools or clinical diagnostics software.
  • Experience working alongside Dev Ops teams on CI/CD improvements.
  • Experience with functional programming paradigms.
  • Experience writing documentation for regulatory or compliance.
Personal Qualifications
  • Pragmatic Architect
    :
    You care about clean code but understand the need to deliver value to the business.
  • Analytical Thinker
    :
    You can look at a third‑party API and immediately spot the edge cases and integration risks.
  • Collaborative
    :
    You will work closely with the Dev Ops and IT teams to ensure high‑availability and smooth deployments.
  • Comfort with Ambiguity
    :
    You can navigate existing systems, document their behavior, and propose paths forward for modernization.
  • Salary range: $121,500–$150,000
  • Medical, dental, and vision insurance
  • Employer‑Sponsored Basic Life/AD&D, Long Term Disability
  • Employee Assistance Program (EAP)
  • Flexible Time Off
  • Stock Option Plan
  • Lunch stipend for days at headquarters
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