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Innovation Postdoctoral Fellow, Data Science & AI Vision Foundation Models Cellular Imaging in AI Drug Discovery

Job in San Diego, San Diego County, California, 92189, USA
Listing for: Scorpion Therapeutics
Full Time position
Listed on 2026-09-18
Job specializations:
  • IT/Tech
    Machine Learning/ ML Engineer, Data Scientist
Salary/Wage Range or Industry Benchmark: 87000 USD Yearly USD 87000.00 YEAR
Job Description & How to Apply Below

Key Responsibilities:

  • Develop vision foundation models for high-content cellular imaging using state-of-the-art self-supervised learning.
  • Design robust evaluation protocols to measure generalization to unseen assays, perturbations, cell types, and imaging conditions.
  • Curate large-scale public and internal microscopy datasets; establish standards for data quality and reproducibility.
  • Extend models to multimodal settings by integrating imaging with other modalities (e.g., compound data) for drug discovery/phenotypic profiling.
  • Build scalable, reproducible training and inference pipelines across HPC and cloud; maintain clean, well-documented code.
  • Propose innovative modeling/evaluation methods; work independently and collaboratively and publish/present results.
Essential Requirements:
  • PhD (or equivalent) in a relevant scientific discipline completed prior to start date (PhD conferred in 2026 only).
  • Demonstrated scientific achievement (publications, presentations, patents, or equivalent).
  • Strong commitment to learning/innovation/professional development.
  • Ability to formulate and drive independent research questions.
  • Proficiency in Python and modern deep learning frameworks (PyTorch, Tensor Flow, or JAX); hands-on GPU training.
  • Experience training on HPC or cloud with reproducible code.
  • Working knowledge of vision foundation models (self-supervised learning, vision transformers) with fine-tuning/adaptation.
  • Experience designing benchmarking/evaluation protocols; strong written and verbal communication.
Desirable Requirements :
  • Pretraining vision foundation models from scratch on large-scale imaging datasets.
  • Expertise in high-content/biomedical imaging (e.g., Cell Painting, phenomics, digital pathology) and channel-adaptive/multimodal architectures.
  • Distributed training on HPC; reproducible ML pipelines on cloud; MLflow.
Benefits & Compensation:
  • Starting salary: $87,000 USD/year; comprehensive benefits (health, life/disability, 401(k) match, time off).
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