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Associate Director, AI​/ML Engineering

Job in South San Francisco, San Mateo County, California, 94083, USA
Listing for: Scorpion Therapeutics
Full Time position
Listed on 2026-07-08
Job specializations:
  • Software Development
    AI Engineer (Applied/Software), Machine Learning/ ML Engineer
Salary/Wage Range or Industry Benchmark: 172000 - 215000 USD Yearly USD 172000.00 215000.00 YEAR
Job Description & How to Apply Below

Position Summary

Associate Director, AI/ML Engineering—hands‑on technical leader designing, architecting, and delivering Generative AI and agentic AI solutions across the enterprise, including safe/reliable deployment in a regulated biopharmaceutical environment.

Primary Responsibilities
  • Design, build, and deploy agentic AI workflows using multi‑agent orchestration frameworks (e.g., Lang Graph, Auto Gen, CrewAI).
  • Architect and implement MCP servers to expose enterprise tools, APIs, and data sources as AI agent capabilities.
  • Connect multi‑agent systems to enterprise databases/internal APIs/MCP for grounded, context‑aware, action‑oriented solutions.
  • Define data contracts, lineage standards, and quality thresholds with cross‑functional teams.
  • Implement agentic memory systems and planning/reasoning loops for reliable autonomous execution.
  • Evaluate accuracy, reliability, latency, cost, and safety via benchmarks and red‑teaming.
  • Build guardrail frameworks (filtering, moderation, policy enforcement, hallucination detection).
  • Develop RAG pipelines (chunking, embeddings, vector stores, retrieval optimization).
  • Apply prompt engineering, few‑shot learning, and fine‑tuning for pharma use cases.
  • Design, develop, validate, and deploy traditional ML models (classification, regression, clustering, time‑series, survival).
  • Build and maintain ML Ops/LLM Ops pipelines (registry, evaluation, prompt/version control, observability, rollback).
Qualifications
  • Master’s or PhD in ML/CS/Data Science/IS or related quantitative field.
  • 7+ years AI/ML engineering, including 3+ years hands‑on Generative AI and agentic AI.
  • Expertise in multi‑agent frameworks (Lang Graph, Auto Gen, CrewAI, Semantic Kernel, or similar).
  • Experience building MCP servers and integrating with enterprise data/APIs/tools.
  • Strong RAG, embeddings, and vector database experience.
  • Proficiency in Python;
    PyTorch/Tensor Flow/scikit‑learn/Hugging Face.
  • Experience with ML Ops/LLM Ops lifecycle management, evaluation, and deployment.
  • Ability to travel domestically/internationally (as required).
  • Experience with RWD/claims/EHR/clinical/translational/biological data is a plus.
Benefits
  • Discretionary bonus and equity; salary range: $172,000–$215,000 USD.
  • Medical/dental/vision; employer‑paid life/disability/travel/EAP.
  • 401(k) with 1:1 match up to 5%; ESPP.
  • 15+ vacation days; 13–15 paid holidays; 10 days paid sick time; paid parental leave.
  • Tuition assistance.
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Position Requirements
10+ Years work experience
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