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Director, Drug Substance Manufacturing & Development

Job in Waltham, Middlesex County, Massachusetts, 02254, USA
Listing for: Cogent Biosciences
Full Time position
Listed on 2026-07-25
Job specializations:
  • Science
    Medical Science, Data Scientist
Salary/Wage Range or Industry Benchmark: 210000 - 240000 USD Yearly USD 210000.00 240000.00 YEAR
Job Description & How to Apply Below

Who We Are

Cogent Biosciences is a publicly traded biotechnology company dedicated to developing precision therapies for genetically defined diseases. By leveraging validated biology and a rational drug discovery approach, Cogent aims to create real solutions that address the underlying drivers of disease and offer meaningful hope to patients.

The company's lead therapeutic candidate, bezuclastinib, is a highly selective tyrosine kinase inhibitor designed to potently target KIT D816V and other mutations in KIT exon 17. These mutations are known drivers of systemic mastocytosis (SM) and advanced gastrointestinal stromal tumors (GIST) – both serious conditions driven by oncogenic KIT signaling. Bezuclastinib is currently being evaluated in multiple registration‑directed trials across Non‑Advanced SM (NonAdvSM), Advanced SM (AdvSM), and GIST.

In July 2025, Cogent announced that its registration‑direct SUMMIT trial in patients with NonAdvSM achieved statistical significance across all primary and key secondary endpoints, and the company is on track to file its first New Drug Application for this patient population by the end of 2025. The company also remains on track to announce top‑line results for its APEX trial in patients with AdvSM in the second half of 2025 and for its PEAK trial in patients with GIST by the end of 2025.

Cogent is also pursuing a Phase 1 study of its novel internally discovered FGFR2 inhibitor and is developing a portfolio of other targeted therapies for genetically driven diseases involving mutations in ErbB2, PI3Kα and KRAS.

The Role

We are seeking an Associate Director responsible for phase‑appropriate small molecule drug substance development. This critical hire will bring a strong process development background and experience managing external vendors and will define and execute on a strategy for synthetic route, process optimization, site transfer, scale‑up and validation.

Responsibilities
  • Subject matter expert for all aspects of drug substance process and controls.
  • Manage development and manufacturing activities at drug substance CDMOs.
  • Lead small molecule drug substance route selection/evaluation, scale up, and process control development including identification of critical process parameters, critical quality attributes, and acceptance criteria.
  • Review and approve external vendor documentation including protocols, reports, raw data, master and executed batch records.
  • Perform impurities fate analysis and manufacturing process parameters assessment and develop an overall end‑to‑end control strategy.
  • Lead solid state evaluation and development activities to support process control, formulation development, and intellectual property protection.
  • Provide drug substance support for quality events including deviation investigation, corrective and preventative action implementation and change control for both internal and external operations.
  • Author, review, and approve documents in support of regulatory filings including module 3 sections of Investigational New Drug (IND) applications and New Drug Application (NDA) as well as CMC section in a global regulatory submission.
  • Provide guidance as a subject matter expert in drug substance manufacturing and development for internal CMC and discovery organization.
  • Provide on‑site support at external suppliers including project initiation, routine visits and technical leadership as needed.
Qualifications
  • Degree in Organic chemistry – Bachelor’s/Master’s degree with 12+ years of experience or PhD degree with 8+ years of experience.
  • Subject matter expert in small molecule drug substance production techniques, processing, and characterization and have a demonstrated track record of successful CDMO management.
  • Extensive experience in small molecule cGMP manufacturing and proficient knowledge of ICH Q7 guidelines.
  • Experience in evaluating and setting phase‑appropriate controls including raw material, in‑process, intermediate, and final drug substance specifications. Familiar with ICH guidelines as they relate to these controls.
  • History writing, reviewing and approving quality documents (batch records, SOPs, change controls) and participating in…
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