Automation Engineer

Automation Engineer

We are seeking an Automation Engineer to support high-throughput automated assays and processes in Sanofi’s Vaccine Research and Development environment. The role focuses on designing and implementing robotic platforms and data‑processing solutions to enhance R&D scientist efficiency, enabling them to concentrate on critical vaccine science. This position requires experienced-level proficiency in biology, engineering, and laboratory automation programming to drive innovation and maintain the highest standards of quality and precision.

Waltham, MA

The Automation Engineer is responsible for executing tasks in the development of automated assays and supporting automation platforms in research laboratory and GxP environments.

• Laboratory Automation and Assay Development (65%)
  • Aid in the development and adaptation of new and existing automation protocols for experimental and analytical assays.
  • Program & test automation equipment to perform assigned methods and experiments in alignment with project objectives.
  • Utilize a broad array of automation‑based & biological techniques to effectively implement & troubleshoot automated laboratory and data management solutions.
  • Assist and guide scientific staff in the loading and performance of automated development or production assays.
  • Prepare and write support manuals, standard operating procedures (SOPs), and validation documents for applications or work processes.
• Operations (20%)
  • Perform general maintenance, cleaning, and servicing of automation equipment to meet HSE, site, and GxP compliance.
  • Manage automation consumables and equipment to ensure platforms operate without issues.
  • Provide guidance, training, and assistance to research staff on proper use of automation equipment.
  • Troubleshoot & resolve day‑to‑day automation technical issues to maintain platform utilization.
• Teamwork / Collaboration (10%)
  • Participate in research teams to aid in the development and execution of automation projects.
  • Collaborate with both automation and research team members to successfully achieve goals within the automation and project teams.
• Scientific Knowledge (5%)
  • Maintain a broad knowledge of automation concepts, practices, and procedures and critically evaluate relevant literature.

M.Sc. with 2 years of relevant automation experience or B.Sc. with 4 years of relevant automation experience. College degree should be in engineering, bioengineering, physical, computer science, or applied science.

• Advanced automation knowledge and programming capabilities on Hamilton liquid handlers and scheduling based software or equivalents.
• Proficiency in preparing, executing, optimizing, and troubleshooting automated laboratory assays.
• Strong problem‑solving, quantitative, debugging, and documentation skills to work independently on supporting projects.
• Strong communication and interpersonal skills for collaborating with end users and other developers.
• Cross‑functional competencies in biology, engineering, automation, and programming.

• Operational knowledge of immunoassay‑based instruments such as flow cytometers, Octet, Luminex, Meso Scale, Biotek, Cytomat, and multi‑mode plate readers.
• Programming knowledge in .NET (VB, C#, ASP), JavaScript, SQL Server, VBA Excel, and MATLAB.
• Operational experience with laboratory automation equipment including plate washers, decappers, robotic arms, automated incubators, and miscellaneous deck‑based liquid handling devices.
• Experience with Molecular Device Softmax Pro software or equivalent in developing analysis protocols.

• Supportive, future‑focused team with opportunities for growth and international mobility.
• Thoughtful rewards package that recognizes contributions and amplifies impact.
• Wide range of health and wellbeing benefits, including high‑quality healthcare, prevention and wellness programs, and at least 14 weeks gender‑neutral parental leave.
• Opportunities to improve the lives of millions globally by accelerating drug development.
• Work at the forefront of drug discovery, harnessing cutting‑edge AI, data, and digital platforms.