×
Register Here to Apply for Jobs or Post Jobs. X

Principal Scientist, Medicinal Chemistry

Job in Watertown, Middlesex County, Massachusetts, 02472, USA
Listing for: Jobtailor
Full Time position
Listed on 2026-08-17
Job specializations:
  • Research/Development
    Drug Discovery, Research Scientist, Pharmaceutical Science/ Research, Biotechnology
Salary/Wage Range or Industry Benchmark: 180000 - 230000 USD Yearly USD 180000.00 230000.00 YEAR
Job Description & How to Apply Below
  • Advance peptide therapeutics, especially macrocyclic peptides, and small molecule programs from screening to development candidate selection
  • Champion cross-functional collaboration with CADD, biophysics, structural biology, DMPK, and biology teams to design molecules, achieve program goals, and meet timelines
  • Implement structure-based and computational drug design to optimize peptide and small molecule therapeutics; prioritize and implement synthesis
  • Manage teams of external synthetic chemists to ensure timely delivery of complex target molecules for biological testing
  • Interpret analytical results to ensure compound quality, data integrity, and project success
  • Stay current with chemistry, medicinal chemistry, project-relevant literature, and new patent application filings
  • Lead research teams or serve as medicinal chemistry lead from concept through lead optimization toward clinical development
  • Collaborate across computational chemistry, biophysics, structural biology, and biology functions to provide actionable insights and strategic guidance
Requirements
  • BS, MS or PhD in organic chemistry, medicinal chemistry, or a closely related field
  • 5-10 years of experience in the biotechnology or pharmaceutical industry, with a proven track record advancing molecules from hit to development candidate selection
  • Expertise in organic chemistry, including automated solid-phase peptide synthesis and solution-phase small molecule synthesis
  • Expertise in medicinal chemistry, data analysis, molecule design, and synthesis to optimize peptides and small molecules for oral delivery
  • Deep knowledge of macrocyclic peptide optimization, including properties required for oral administration
  • Proficiency in structure-based ligand design for peptide and small molecule optimization
  • Experience with computational modeling and simulation for peptide and small molecule design and optimization
  • Experience using peptide informatics tools for SAR
  • Familiarity with machine learning and AI-driven drug discovery platforms
  • Experience leading and managing teams of external chemists
  • Hands-on, collaborative ability to work across biology, structural biology, computational chemistry, and biophysics
  • Excellent communication skills in a multidisciplinary environment
  • Excellent organizational skills and attention to detail
  • Familiarity with library-based screening technologies including DEL, mRNA display, and phage display
  • Direct experience with screen follow-up and fragment-based drug discovery
  • Experience progressing programs through lead optimization for immunology targets
  • Familiarity with molecular modeling tools
  • Proficiency with data analysis tools such as Spotfire
Core Competencies

Demonstrates expertise in organic and medicinal chemistry, with a strong focus on advancing peptide and small molecule therapeutics from concept to clinical development. Proven ability to lead cross-functional teams and implement structure-based drug design methodologies to optimize compounds for oral delivery.

Highest-signal resume keywords
  • Organic Chemistry Expertise
  • Medicinal Chemistry Leadership
  • Structure-Based Ligand Design
  • Computational Modeling Experience
  • Team Management in Drug Discovery
ATS Optimization Keywords Hard Skills
  • Automated Solid-Phase Peptide Synthesis
  • Solution-Phase Small Molecule Synthesis
  • Data Analysis for Molecule Design
  • Macrocyclic Peptide Optimization
  • Peptide Informatics Tools
  • Machine Learning in Drug Discovery
  • Fragment-Based Drug Discovery
  • Library-Based Screening Technologies
  • Molecular Modeling Tools
  • Lead Optimization for Immunology Targets
Soft Skills
  • Excellent Communication Skills
  • Organizational Skills
  • Attention to Detail
  • Collaborative Ability
Industry Keywords
  • Biotechnology
  • Pharmaceutical Industry
  • Peptide Therapeutics
  • Small Molecule Programs
  • Cross-Functional Collaboration
Tools & Technologies
  • Computational Drug Design
  • Data Analysis Tools
  • Spotfire
#J-18808-Ljbffr
To View & Apply for jobs on this site that accept applications from your location or country, tap the button below to make a Search.
(If this job is in fact in your jurisdiction, then you may be using a Proxy or VPN to access this site, and to progress further, you should change your connectivity to another mobile device or PC).
 
 
 
Search for further Jobs Here:
(Try combinations for better Results! Or enter less keywords for broader Results)
Location
Increase/decrease your Search Radius (miles)
0
200
Filters
Education Level
Experience Level (years)
Posted in last:
Salary